There are many opinions on this...
Some say a shorter barrel is stiffer, a stiffer barrel will "whip" less so be more accurate...
Personally, I see only one, negative reason for doing this. calibers like .308 get a bit loud when made short. (You actually do not increase the sound, you simply are moving the muzzle closer to the shooters ears.) I like short barrels, but only on the pistol caliber rifles. I have a couple short barreled Marlins and do not like shooting them for this very reason.
As mentioned, spend the $$ on a good quality crown for better accuracy. A good crown REQUIRES a true and square muzzle. A out of square muzzle is a often overlooked acpect of accuracy loss form a home "pruned" barrel.
Good luck,
CW