The simplest solution is to purchase an LBT mold. I've designed all this trouble out of them.
The problem is caused by the cavities being too close together for a metal with relitively slow thermal conductivity. Cast iron molds are worse than steel, and steel about twice as slow as aluminum, if all three metals have the same space between cavities. (I use aluminum and give them a lot more space, which combined with several other features I won't spend time explaining, is why LBT molds cast perfect bullets consistently.)
If you cast in just one cavity at a time you will probably get perfect bullets. -- When the second cavity is filled the thin web between cavities gets extremely hot, which prevents it from solidifying before the sprue. IF the sprue solidifies first, you'll have undersize in the middle and shrink pockets in the bullet sides, especially in the area where the thin web is.