With a shotshell load, an optical chronograph will read about 30 FPS higher than an inductive chrono measuring the same load. That is fact, I've chrono'd both ways. I don't have an explanation that I'm absolutely sure of as to why that is so. I've heard that it's because the optical trips on the first pellet through, which is travelling faster than the bulk of the load. True or not, I can't say, but it sounds plausable. So, no, I wouldn't worry a bit about your higher velocities.
That difference in reading applies only to shot loads.
DC